IL_9BS0_063
3D structure
- PDB id
- 9BS0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- YphC-treated 45SYphC particle. Class 5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- 9BS0|1|A|G|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BS0_063 not in the Motif Atlas
- Geometric match to IL_5TBW_474
- Geometric discrepancy: 0.2532
- The information below is about IL_5TBW_474
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.2
- Basepair signature
- cWW-tHW-L-cWW-cWW-tSH-cWW-R-L-L
- Number of instances in this motif group
- 6
Unit IDs
9BS0|1|A|G|1711
9BS0|1|A|G|1712
9BS0|1|A|A|1713
9BS0|1|A|A|1714
9BS0|1|A|C|1715
9BS0|1|A|U|1716
9BS0|1|A|C|1717
9BS0|1|A|G|1718
9BS0|1|A|G|1719
*
9BS0|1|A|C|2019
9BS0|1|A|U|2020
9BS0|1|A|G|2021
9BS0|1|A|U|2022
9BS0|1|A|C|2023
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- Large ribosomal subunit protein uL3
- Chain H
- Large ribosomal subunit protein uL14
Coloring options: