IL_9BS0_078

3D structure

PDB id

9BS0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

YphC-treated 45SYphC particle. Class 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUAGGAG*CAUCGGUGGGAUACUAC

Length

24 nucleotides

Bulged bases

9BS0|1|A|U|2151, 9BS0|1|A|A|2155, 9BS0|1|A|U|2196, 9BS0|1|A|U|2201, 9BS0|1|A|A|2202

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BS0|1|A|G|2150
9BS0|1|A|U|2151
9BS0|1|A|A|2152
9BS0|1|A|G|2153
9BS0|1|A|G|2154
9BS0|1|A|A|2155
9BS0|1|A|G|2156
*
9BS0|1|A|C|2190
9BS0|1|A|A|2191
9BS0|1|A|U|2192
9BS0|1|A|C|2193
9BS0|1|A|G|2194
9BS0|1|A|G|2195
9BS0|1|A|U|2196
9BS0|1|A|G|2197
9BS0|1|A|G|2198
9BS0|1|A|G|2199
9BS0|1|A|A|2200
9BS0|1|A|U|2201
9BS0|1|A|A|2202
9BS0|1|A|C|2203
9BS0|1|A|U|2204
9BS0|1|A|A|2205
9BS0|1|A|C|2206

Current chains

Chain A

23S rRNA

Nearby chains

Chain W

GTPase Der

Chain Y

Large ribosomal subunit protein uL1