IL_9BS0_079

3D structure

PDB id

9BS0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

YphC-treated 45SYphC particle. Class 5

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCUUGGAAACCG*CGGUGGAGG

Length

21 nucleotides

Bulged bases

9BS0|1|A|U|2159, 9BS0|1|A|U|2160, 9BS0|1|A|C|2167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BS0|1|A|C|2157
9BS0|1|A|C|2158
9BS0|1|A|U|2159
9BS0|1|A|U|2160
9BS0|1|A|G|2161
9BS0|1|A|G|2162
9BS0|1|A|A|2163
9BS0|1|A|A|2164
9BS0|1|A|A|2165
9BS0|1|A|C|2166
9BS0|1|A|C|2167
9BS0|1|A|G|2168
*
9BS0|1|A|C|2181
9BS0|1|A|G|2182
9BS0|1|A|G|2183
9BS0|1|A|U|2184
9BS0|1|A|G|2185
9BS0|1|A|G|2186
9BS0|1|A|A|2187
9BS0|1|A|G|2188
9BS0|1|A|G|2189

Current chains

Chain A

23S rRNA

Nearby chains