3D structure

PDB id
9BSS (explore in PDB, NAKB, or RNA 3D Hub)
Description
45SRbgA particle in complex with RbgA and YphC. Class B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GGAGGUAGA*UCCGAAUGCC
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9BSS|1|A|G|902
9BSS|1|A|G|903
9BSS|1|A|A|904
9BSS|1|A|G|905
9BSS|1|A|G|906
9BSS|1|A|U|907
9BSS|1|A|A|908
9BSS|1|A|G|909
9BSS|1|A|A|910
*
9BSS|1|A|U|960
9BSS|1|A|C|961
9BSS|1|A|C|962
9BSS|1|A|G|963
9BSS|1|A|A|964
9BSS|1|A|A|965
9BSS|1|A|U|966
9BSS|1|A|G|967
9BSS|1|A|C|968
9BSS|1|A|C|969

Current chains

Chain A
23S rRNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain Q
Large ribosomal subunit protein bL27
Chain S
Large ribosomal subunit protein uL30

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.0681 s