IL_9BSS_036

3D structure

PDB id

9BSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

45SRbgA particle in complex with RbgA and YphC. Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAAAAG*CGAAAAUGUACCGGGGC

Length

24 nucleotides

Bulged bases

9BSS|1|A|U|1176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BSS|1|A|G|1070
9BSS|1|A|G|1071
9BSS|1|A|A|1072
9BSS|1|A|A|1073
9BSS|1|A|A|1074
9BSS|1|A|A|1075
9BSS|1|A|G|1076
*
9BSS|1|A|C|1170
9BSS|1|A|G|1171
9BSS|1|A|A|1172
9BSS|1|A|A|1173
9BSS|1|A|A|1174
9BSS|1|A|A|1175
9BSS|1|A|U|1176
9BSS|1|A|G|1177
9BSS|1|A|U|1178
9BSS|1|A|A|1179
9BSS|1|A|C|1180
9BSS|1|A|C|1181
9BSS|1|A|G|1182
9BSS|1|A|G|1183
9BSS|1|A|G|1184
9BSS|1|A|G|1185
9BSS|1|A|C|1186

Current chains

Chain A

23S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain D

Large ribosomal subunit protein uL3

Chain G

Large ribosomal subunit protein uL13