3D structure

PDB id
9BSS (explore in PDB, NAKB, or RNA 3D Hub)
Description
45SRbgA particle in complex with RbgA and YphC. Class B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
AAGGGCUGUGAAG*UGGAGCGCUU
Length
23 nucleotides
Bulged bases
9BSS|1|A|U|1251
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9BSS|1|A|A|1243
9BSS|1|A|A|1244
9BSS|1|A|G|1245
9BSS|1|A|G|1246
9BSS|1|A|G|1247
9BSS|1|A|C|1248
9BSS|1|A|U|1249
9BSS|1|A|G|1250
9BSS|1|A|U|1251
9BSS|1|A|G|1252
9BSS|1|A|A|1253
9BSS|1|A|A|1254
9BSS|1|A|G|1255
*
9BSS|1|A|U|1274
9BSS|1|A|G|1275
9BSS|1|A|G|1276
9BSS|1|A|A|1277
9BSS|1|A|G|1278
9BSS|1|A|C|1279
9BSS|1|A|G|1280
9BSS|1|A|C|1281
9BSS|1|A|U|1282
9BSS|1|A|U|1283

Current chains

Chain A
23S rRNA

Nearby chains

Chain E
Large ribosomal subunit protein uL4
Chain I
Large ribosomal subunit protein uL15
Chain L
Large ribosomal subunit protein bL20

Coloring options:

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