3D structure

PDB id
9BSS (explore in PDB, NAKB, or RNA 3D Hub)
Description
45SRbgA particle in complex with RbgA and YphC. Class B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GGAG*CACAC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9BSS|1|A|G|1478
9BSS|1|A|G|1479
9BSS|1|A|A|1480
9BSS|1|A|G|1481
*
9BSS|1|A|C|1605
9BSS|1|A|A|1606
9BSS|1|A|C|1607
9BSS|1|A|A|1608
9BSS|1|A|C|1609

Current chains

Chain A
23S rRNA

Nearby chains

Chain C
Large ribosomal subunit protein uL2

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.0577 s