IL_9BSS_073

3D structure

PDB id

9BSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

45SRbgA particle in complex with RbgA and YphC. Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUACAGGAUAGG*CC

Length

14 nucleotides

Bulged bases

9BSS|1|A|U|2140, 9BSS|1|A|A|2141, 9BSS|1|A|G|2145, 9BSS|1|A|U|2147

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BSS|1|A|G|2139
9BSS|1|A|U|2140
9BSS|1|A|A|2141
9BSS|1|A|C|2142
9BSS|1|A|A|2143
9BSS|1|A|G|2144
9BSS|1|A|G|2145
9BSS|1|A|A|2146
9BSS|1|A|U|2147
9BSS|1|A|A|2148
9BSS|1|A|G|2149
9BSS|1|A|G|2150
*
9BSS|1|A|C|2207
9BSS|1|A|C|2208

Current chains

Chain A

23S rRNA

Nearby chains

Chain W

GTPase Der

Chain Y

Large ribosomal subunit protein uL1