IL_9C6I_001

3D structure

PDB id

9C6I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a group IIC intron RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

GCAUG*CUUACC

Length

11 nucleotides

Bulged bases

9C6I|1|A|U|13, 9C6I|1|A|A|260, 9C6I|1|A|C|261

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C6I|1|A|G|10
9C6I|1|A|C|11
9C6I|1|A|A|12
9C6I|1|A|U|13
9C6I|1|A|G|14
*
9C6I|1|A|C|257
9C6I|1|A|U|258
9C6I|1|A|U|259
9C6I|1|A|A|260
9C6I|1|A|C|261
9C6I|1|A|C|262

Current chains

Chain A

Group IIC Intron

Nearby chains