IL_9C6I_006

3D structure

PDB id

9C6I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a group IIC intron RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

AUAUGAGG*UAAAU

Length

13 nucleotides

Bulged bases

9C6I|1|A|U|152, 9C6I|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C6I|1|A|A|149
9C6I|1|A|U|150
9C6I|1|A|A|151
9C6I|1|A|U|152
9C6I|1|A|G|153
9C6I|1|A|A|154
9C6I|1|A|G|155
9C6I|1|A|G|156
*
9C6I|1|A|U|221
9C6I|1|A|A|222
9C6I|1|A|A|223
9C6I|1|A|A|224
9C6I|1|A|U|225

Current chains

Chain A

Group IIC Intron

Nearby chains