IL_9C8K_004
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUUAAG*CGC
- Length
- 10 nucleotides
- Bulged bases
- 9C8K|1|1|A|46
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C8K_004 not in the Motif Atlas
- Homologous match to IL_8P9A_376
- Geometric discrepancy: 0.1899
- The information below is about IL_8P9A_376
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_88082.2
- Basepair signature
- cWW-L-tSS-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9C8K|1|1|G|41
9C8K|1|1|A|42
9C8K|1|1|U|43
9C8K|1|1|U|44
9C8K|1|1|A|45
9C8K|1|1|A|46
9C8K|1|1|G|47
*
9C8K|1|1|C|479
9C8K|1|1|G|480
9C8K|1|1|C|481
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain X
- uS12
Coloring options: