IL_9C8K_011
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAGAUCAAAACCAACC*GCUUUGGUGACUCUAG
- Length
- 32 nucleotides
- Bulged bases
- 9C8K|1|1|A|226, 9C8K|1|1|U|227, 9C8K|1|1|C|228, 9C8K|1|1|U|285, 9C8K|1|1|U|286, 9C8K|1|1|U|294
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9C8K|1|1|C|223
9C8K|1|1|A|224
9C8K|1|1|G|225
9C8K|1|1|A|226
9C8K|1|1|U|227
9C8K|1|1|C|228
9C8K|1|1|A|229
9C8K|1|1|A|230
9C8K|1|1|A|231
9C8K|1|1|A|232
9C8K|1|1|C|233
9C8K|1|1|C|234
9C8K|1|1|A|235
9C8K|1|1|A|236
9C8K|1|1|C|237
9C8K|1|1|C|238
*
9C8K|1|1|G|283
9C8K|1|1|C|284
9C8K|1|1|U|285
9C8K|1|1|U|286
9C8K|1|1|U|287
9C8K|1|1|G|288
9C8K|1|1|G|289
9C8K|1|1|U|290
9C8K|1|1|G|291
9C8K|1|1|A|292
9C8K|1|1|C|293
9C8K|1|1|U|294
9C8K|1|1|C|295
9C8K|1|1|U|296
9C8K|1|1|A|297
9C8K|1|1|G|298
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein eS4
- Chain G
- eS6
- Chain I
- eS8
- Chain L
- uS17
Coloring options: