IL_9C8K_033
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAAAAAUU*ACCGCAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C8K_033 not in the Motif Atlas
- Homologous match to IL_8C3A_503
- Geometric discrepancy: 0.516
- The information below is about IL_8C3A_503
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44416.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
9C8K|1|1|G|807
9C8K|1|1|A|808
9C8K|1|1|A|809
9C8K|1|1|A|810
9C8K|1|1|A|811
9C8K|1|1|A|812
9C8K|1|1|A|813
9C8K|1|1|U|814
9C8K|1|1|U|815
*
9C8K|1|1|A|849
9C8K|1|1|C|850
9C8K|1|1|C|851
9C8K|1|1|G|852
9C8K|1|1|C|853
9C8K|1|1|A|854
9C8K|1|1|G|855
9C8K|1|1|C|856
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein eS4
- Chain J
- uS4
- Chain L
- uS17
- Chain W
- uS8
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