IL_9C8K_036

3D structure

PDB id

9C8K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGCCGGGG*CAAGAAUG

Length

17 nucleotides

Bulged bases

9C8K|1|1|G|933

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C8K|1|1|C|927
9C8K|1|1|G|928
9C8K|1|1|G|929
9C8K|1|1|C|930
9C8K|1|1|C|931
9C8K|1|1|G|932
9C8K|1|1|G|933
9C8K|1|1|G|934
9C8K|1|1|G|935
*
9C8K|1|1|C|1007
9C8K|1|1|A|1008
9C8K|1|1|A|1009
9C8K|1|1|G|1010
9C8K|1|1|A|1011
9C8K|1|1|A|1012
9C8K|1|1|U|1013
9C8K|1|1|G|1014

Current chains

Chain 1

18S ribosomal RNA

Nearby chains

Chain B

eS1

Chain N

uS15

Chain a

40S ribosomal protein S26

Chain b

eS27