IL_9C8K_047
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUAAUUUGACUCAACACGGGAAACCUCAC*GGCUG
- Length
- 35 nucleotides
- Bulged bases
- 9C8K|1|1|A|1253, 9C8K|1|1|G|1256, 9C8K|1|1|A|1258, 9C8K|1|1|U|1519
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9C8K|1|1|C|1237
9C8K|1|1|U|1238
9C8K|1|1|U|1239
9C8K|1|1|A|1240
9C8K|1|1|A|1241
9C8K|1|1|U|1242
9C8K|1|1|U|1243
9C8K|1|1|U|1244
9C8K|1|1|G|1245
9C8K|1|1|A|1246
9C8K|1|1|C|1247
9C8K|1|1|U|1248
9C8K|1|1|C|1249
9C8K|1|1|A|1250
9C8K|1|1|A|1251
9C8K|1|1|C|1252
9C8K|1|1|A|1253
9C8K|1|1|C|1254
9C8K|1|1|G|1255
9C8K|1|1|G|1256
9C8K|1|1|G|1257
9C8K|1|1|A|1258
9C8K|1|1|A|1259
9C8K|1|1|A|1260
9C8K|1|1|C|1261
9C8K|1|1|C|1262
9C8K|1|1|U|1263
9C8K|1|1|C|1264
9C8K|1|1|A|1265
9C8K|1|1|C|1266
*
9C8K|1|1|G|1516
9C8K|1|1|G|1517
9C8K|1|1|C|1518
9C8K|1|1|U|1519
9C8K|1|1|G|1520
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain K
- S10_plectin domain-containing protein
- Chain P
- 40S ribosomal protein uS19
- Chain Q
- uS9
- Chain S
- uS13
- Chain U
- uS10
- Chain d
- uS14
- Chain f
- eS31
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