IL_9C8K_063
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGCCUACCC*GGUAACC
- Length
- 17 nucleotides
- Bulged bases
- 9C8K|1|1|G|1552, 9C8K|1|1|C|1553, 9C8K|1|1|C|1554, 9C8K|1|1|U|1555, 9C8K|1|1|A|1580, 9C8K|1|1|C|1581
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9C8K|1|1|G|1550
9C8K|1|1|U|1551
9C8K|1|1|G|1552
9C8K|1|1|C|1553
9C8K|1|1|C|1554
9C8K|1|1|U|1555
9C8K|1|1|A|1556
9C8K|1|1|C|1557
9C8K|1|1|C|1558
9C8K|1|1|C|1559
*
9C8K|1|1|G|1576
9C8K|1|1|G|1577
9C8K|1|1|U|1578
9C8K|1|1|A|1579
9C8K|1|1|A|1580
9C8K|1|1|C|1581
9C8K|1|1|C|1582
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain D
- 40S ribosomal protein uS3
- Chain K
- S10_plectin domain-containing protein
- Chain T
- 40S ribosomal protein eS19
- Chain U
- uS10
- Chain d
- uS14
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