IL_9C8K_068

3D structure

PDB id

9C8K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCGCU*AAAAGUC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C8K|1|1|G|1706
9C8K|1|1|U|1707
9C8K|1|1|C|1708
9C8K|1|1|G|1709
9C8K|1|1|C|1710
9C8K|1|1|U|1711
*
9C8K|1|1|A|1822
9C8K|1|1|A|1823
9C8K|1|1|A|1824
9C8K|1|1|A|1825
9C8K|1|1|G|1826
9C8K|1|1|U|1827
9C8K|1|1|C|1828

Current chains

Chain 1

18S ribosomal RNA

Nearby chains

Chain X

uS12

Chain e

40S ribosomal protein eS30