IL_9C8K_070
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAU*AGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C8K_070 not in the Motif Atlas
- Homologous match to IL_8C3A_475
- Geometric discrepancy: 0.2013
- The information below is about IL_8C3A_475
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.13
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
9C8K|1|1|C|1717
9C8K|1|1|G|1718
9C8K|1|1|A|1719
9C8K|1|1|U|1720
*
9C8K|1|1|A|1813
9C8K|1|1|G|1814
9C8K|1|1|A|1815
9C8K|1|1|G|1816
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: