IL_9C8K_078

3D structure

PDB id

9C8K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGUGGGAC*GG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C8K|1|2|C|4
9C8K|1|2|U|5
9C8K|1|2|G|6
9C8K|1|2|U|7
9C8K|1|2|G|8
9C8K|1|2|G|9
9C8K|1|2|G|10
9C8K|1|2|A|11
9C8K|1|2|C|12
*
9C8K|1|2|G|49
9C8K|1|2|G|50

Current chains

Chain 2

RHDV Reinitiation stimulating element RNA

Nearby chains

Chain 1

Small subunit ribosomal RNA; SSU rRNA

Chain B

eS1

Chain b

eS27