IL_9CG5_019
3D structure
- PDB id
- 9CG5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex (tRNA-fMet M1 + UUG start codon)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9CG5_019 not in the Motif Atlas
- Homologous match to IL_5J7L_020
- Geometric discrepancy: 0.1025
- The information below is about IL_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
9CG5|1|A|U|409
9CG5|1|A|G|410
9CG5|1|A|A|411
9CG5|1|A|A|412
9CG5|1|A|G|413
9CG5|1|A|A|414
9CG5|1|A|A|415
9CG5|1|A|G|416
*
9CG5|1|A|U|427
9CG5|1|A|G|428
9CG5|1|A|U|429
9CG5|1|A|A|430
9CG5|1|A|A|431
9CG5|1|A|A|432
9CG5|1|A|G|433
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
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