IL_9CG5_080
3D structure
- PDB id
- 9CG5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex (tRNA-fMet M1 + UUG start codon)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 9CG5|1|a|G|801, 9CG5|1|a|G|805
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9CG5_080 not in the Motif Atlas
- Homologous match to IL_9DFE_016
- Geometric discrepancy: 0.0828
- The information below is about IL_9DFE_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9CG5|1|a|G|674
9CG5|1|a|A|675
9CG5|1|a|A|676
9CG5|1|a|A|677
9CG5|1|a|C|678
*
9CG5|1|a|G|799
9CG5|1|a|A|800
9CG5|1|a|G|801
9CG5|1|a|A|802
9CG5|1|a|U|803
9CG5|1|a|A|804
9CG5|1|a|G|805
9CG5|1|a|C|806
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain e
- 50S ribosomal protein L4
- Chain k
- 50S ribosomal protein L15
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