IL_9CGU_002
3D structure
- PDB id
- 9CGU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cas9 ternary complex, 14-nt sgRNA, State II (kinked)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAG*CTC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: UGAG,CTCA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9CGU|1|B|G|14
9CGU|1|B|A|15
9CGU|1|B|G|16
*
9CGU|1|C|DC|15
9CGU|1|C|DT|16
9CGU|1|C|DC|17
Current chains
- Chain B
- sgRNA
- Chain C
- Target strand
Nearby chains
- Chain A
- CRISPR-associated endonuclease Cas9/Csn1
Coloring options: