IL_9CN3_036

3D structure

PDB id

9CN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 39S mitoribosome in complex with antibiotic Linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

GCAA*UAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9CN3_036 not in the Motif Atlas

Geometric match to IL_8CRE_096

Geometric discrepancy: 0.2058

The information below is about IL_8CRE_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_55516.2

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

7

Unit IDs

9CN3|1|A|G|2712
9CN3|1|A|C|2713
9CN3|1|A|A|2714
9CN3|1|A|A|2715
*
9CN3|1|A|U|3104
9CN3|1|A|A|3105
9CN3|1|A|C|3106

Current chains

Chain A

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain E

39S ribosomal protein L3, mitochondrial

Chain K

39S ribosomal protein L13, mitochondrial