IL_9D7T_024
3D structure
- PDB id
- 9D7T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with Api137 antimicrobial peptide, mRNA, A-site release factor 1, and deacylated P-site and E-site tRNAphe at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CGCUGAC*GGUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 9D7T|1|1A|G|932
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9D7T_024 not in the Motif Atlas
- Geometric match to IL_8VTW_349
- Geometric discrepancy: 0.039
- The information below is about IL_8VTW_349
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48600.1
- Basepair signature
- cWW-L-cWW-cWW-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
9D7T|1|1A|C|844
9D7T|1|1A|G|845
9D7T|1|1A|C|846
9D7T|1|1A|U|847
9D7T|1|1A|G|848
9D7T|1|1A|A|849
9D7T|1|1A|C|850
*
9D7T|1|1A|G|927
9D7T|1|1A|G|928
9D7T|1|1A|U|930
9D7T|1|1A|G|931
9D7T|1|1A|G|932
9D7T|1|1A|A|933
9D7T|1|1A|G|934
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 13
- 50S ribosomal protein L30
Coloring options: