IL_9E73_004

3D structure

PDB id

9E73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RaiA RNA from Clostridium acetobutylicum

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUGCGGCUUAGAAGUAAG*CGAGUGUGGGGUC

Length

32 nucleotides

Bulged bases

9E73|1|A|G|84

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E73|1|A|G|83
9E73|1|A|G|84
9E73|1|A|U|85
9E73|1|A|G|86
9E73|1|A|C|87
9E73|1|A|G|88
9E73|1|A|G|89
9E73|1|A|C|90
9E73|1|A|U|91
9E73|1|A|U|92
9E73|1|A|A|93
9E73|1|A|G|94
9E73|1|A|A|95
9E73|1|A|A|96
9E73|1|A|G|97
9E73|1|A|U|98
9E73|1|A|A|99
9E73|1|A|A|100
9E73|1|A|G|101
*
9E73|1|A|C|169
9E73|1|A|G|170
9E73|1|A|A|171
9E73|1|A|G|172
9E73|1|A|U|173
9E73|1|A|G|174
9E73|1|A|U|175
9E73|1|A|G|176
9E73|1|A|G|177
9E73|1|A|G|178
9E73|1|A|G|179
9E73|1|A|U|180
9E73|1|A|C|181

Current chains

Chain A

RNA (204-MER)

Nearby chains