IL_9EBB_007
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EBB_007 not in the Motif Atlas
- Homologous match to IL_8B0X_065
- Geometric discrepancy: 0.073
- The information below is about IL_8B0X_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22311.3
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 11
Unit IDs
9EBB|1|I|G|24
9EBB|1|I|U|25
9EBB|1|I|G|26
9EBB|1|I|G|27
9EBB|1|I|A|28
9EBB|1|I|U|29
9EBB|1|I|G|30
*
9EBB|1|I|C|598
9EBB|1|I|U|599
9EBB|1|I|G|600
9EBB|1|I|A|601
9EBB|1|I|A|602
9EBB|1|I|A|603
9EBB|1|I|C|604
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
Coloring options: