IL_9EBB_041

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCGAUGG*UUACUGACG

Length

16 nucleotides

Bulged bases

9EBB|1|I|A|1025, 9EBB|1|I|C|1026

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EBB|1|I|C|1005
9EBB|1|I|C|1006
9EBB|1|I|G|1007
9EBB|1|I|A|1008
9EBB|1|I|U|1009
9EBB|1|I|G|1010
9EBB|1|I|G|1011
*
9EBB|1|I|U|1023
9EBB|1|I|U|1024
9EBB|1|I|A|1025
9EBB|1|I|C|1026
9EBB|1|I|U|1027
9EBB|1|I|G|1028
9EBB|1|I|A|1029
9EBB|1|I|C|1030
9EBB|1|I|G|1031

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain V

50S ribosomal protein L25