IL_9EBB_064

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAU*GAG

Length

7 nucleotides

Bulged bases

9EBB|1|I|A|1591

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9EBB_064 not in the Motif Atlas

Geometric match to IL_4M6D_011

Geometric discrepancy: 0.3084

The information below is about IL_4M6D_011

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

9EBB|1|I|C|1589
9EBB|1|I|G|1590
9EBB|1|I|A|1591
9EBB|1|I|U|1592
*
9EBB|1|I|G|1613
9EBB|1|I|A|1614
9EBB|1|I|G|1615

Current chains

Chain I

23S ribosomal RNA

Nearby chains