IL_9EBB_090
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 9EBB|1|I|A|2176, 9EBB|1|I|U|2182, 9EBB|1|I|U|2201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EBB_090 not in the Motif Atlas
- Homologous match to IL_7A0S_072
- Geometric discrepancy: 0.1217
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
9EBB|1|I|C|2172
9EBB|1|I|G|2173
9EBB|1|I|A|2174
9EBB|1|I|A|2175
9EBB|1|I|A|2176
9EBB|1|I|U|2177
9EBB|1|I|U|2178
9EBB|1|I|C|2179
9EBB|1|I|C|2180
9EBB|1|I|U|2181
9EBB|1|I|U|2182
9EBB|1|I|G|2183
*
9EBB|1|I|C|2199
9EBB|1|I|C|2200
9EBB|1|I|U|2201
9EBB|1|I|G|2202
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain x
- Mitochondrial domain of uncharacterized function (DUF1713)
Coloring options: