Loop IL_9EBB

3D structure

PDB id: 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
Description: Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

Loop

Sequence: UUUGUGUAGGAUAGGUGGGAG*CGUUGUUGAAAUACCACUCUGA
Length: 43 nucleotides
Bulged bases: 9EBB|1|I|G|2347, 9EBB|1|I|U|2348, 9EBB|1|I|G|2353, 9EBB|1|I|U|2355, 9EBB|1|I|G|2361, 9EBB|1|I|U|2401, 9EBB|1|I|G|2405, 9EBB|1|I|A|2406, 9EBB|1|I|A|2408, 9EBB|1|I|A|2410, 9EBB|1|I|C|2411, 9EBB|1|I|C|2412, 9EBB|1|I|C|2414, 9EBB|1|I|U|2417
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

9EBB|1|I|U|2344
9EBB|1|I|U|2345
9EBB|1|I|U|2346
9EBB|1|I|G|2347
9EBB|1|I|U|2348
9EBB|1|I|G|2349
9EBB|1|I|U|2350
9EBB|1|I|A|2351
9EBB|1|I|G|2352
9EBB|1|I|G|2353
9EBB|1|I|A|2354
9EBB|1|I|U|2355
9EBB|1|I|A|2356
9EBB|1|I|G|2357
9EBB|1|I|G|2358
9EBB|1|I|U|2359
9EBB|1|I|G|2360
9EBB|1|I|G|2361
9EBB|1|I|G|2362
9EBB|1|I|A|2363
9EBB|1|I|G|2364
*
9EBB|1|I|C|2398
9EBB|1|I|G|2399
9EBB|1|I|U|2400
9EBB|1|I|U|2401
9EBB|1|I|G|2402
9EBB|1|I|U|2403
9EBB|1|I|U|2404
9EBB|1|I|G|2405
9EBB|1|I|A|2406
9EBB|1|I|A|2407
9EBB|1|I|A|2408
9EBB|1|I|U|2409
9EBB|1|I|A|2410
9EBB|1|I|C|2411
9EBB|1|I|C|2412
9EBB|1|I|A|2413
9EBB|1|I|C|2414
9EBB|1|I|U|2415
9EBB|1|I|C|2416
9EBB|1|I|U|2417
9EBB|1|I|G|2418
9EBB|1|I|A|2419

Current chains

Chain I: 23S ribosomal RNA

Nearby chains

No other chains within 10Å

IL_9EBB_096