IL_9EBB_097

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GACUGUGAAACC*GGCGGAGUC

Length

21 nucleotides

Bulged bases

9EBB|1|I|G|2368, 9EBB|1|I|U|2369, 9EBB|1|I|G|2393, 9EBB|1|I|A|2395

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EBB|1|I|G|2364
9EBB|1|I|A|2365
9EBB|1|I|C|2366
9EBB|1|I|U|2367
9EBB|1|I|G|2368
9EBB|1|I|U|2369
9EBB|1|I|G|2370
9EBB|1|I|A|2371
9EBB|1|I|A|2372
9EBB|1|I|A|2373
9EBB|1|I|C|2374
9EBB|1|I|C|2375
*
9EBB|1|I|G|2390
9EBB|1|I|G|2391
9EBB|1|I|C|2392
9EBB|1|I|G|2393
9EBB|1|I|G|2394
9EBB|1|I|A|2395
9EBB|1|I|G|2396
9EBB|1|I|U|2397
9EBB|1|I|C|2398

Current chains

Chain I

23S ribosomal RNA

Nearby chains