3D structure

PDB id
9EBB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
UGAAAUC*GCGUG
Length
12 nucleotides
Bulged bases
9EBB|1|a|U|623
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9EBB|1|a|U|596
9EBB|1|a|G|597
9EBB|1|a|A|598
9EBB|1|a|A|599
9EBB|1|a|A|600
9EBB|1|a|U|601
9EBB|1|a|C|602
*
9EBB|1|a|G|620
9EBB|1|a|C|621
9EBB|1|a|G|622
9EBB|1|a|U|623
9EBB|1|a|G|624

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain d
30S ribosomal protein S4
Chain h
30S ribosomal protein S8
Chain p
30S ribosomal protein S16
Chain q
30S ribosomal protein S17

Coloring options:

Copyright 2026 BGSU RNA group. Database contents are licensed under Creative Commons Attribution 4.0 International (CC BY 4.0). Page generated in 0.0563 s