IL_9EBB_150
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAGGG*UGGG
- Length
- 9 nucleotides
- Bulged bases
- 9EBB|1|a|G|656
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EBB_150 not in the Motif Atlas
- Homologous match to IL_8B0X_032
- Geometric discrepancy: 0.0744
- The information below is about IL_8B0X_032
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
9EBB|1|a|C|653
9EBB|1|a|A|654
9EBB|1|a|G|655
9EBB|1|a|G|656
9EBB|1|a|G|657
*
9EBB|1|a|U|731
9EBB|1|a|G|732
9EBB|1|a|G|733
9EBB|1|a|G|734
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain f
- 30S ribosomal protein S6
- Chain o
- 30S ribosomal protein S15
- Chain r
- Small ribosomal subunit protein bS18
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