IL_9EBB_160

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GACAU*GC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9EBB_160 not in the Motif Atlas

Geometric match to IL_8B0X_042

Geometric discrepancy: 0.2556

The information below is about IL_8B0X_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49794.1

Basepair signature

cWW-cWS-L-cWW-L

Number of instances in this motif group

2

Unit IDs

9EBB|1|a|G|986
9EBB|1|a|A|987
9EBB|1|a|C|988
9EBB|1|a|A|989
9EBB|1|a|U|990
*
9EBB|1|a|G|1035
9EBB|1|a|C|1036

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain 9

Small ribosomal subunit protein uS14