3D structure

PDB id
9EBB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
GCUG*CGAAUC
Length
10 nucleotides
Bulged bases
9EBB|1|a|U|1249, 9EBB|1|a|A|1272, 9EBB|1|a|U|1273
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9EBB|1|a|G|1247
9EBB|1|a|C|1248
9EBB|1|a|U|1249
9EBB|1|a|G|1250
*
9EBB|1|a|C|1269
9EBB|1|a|G|1270
9EBB|1|a|A|1271
9EBB|1|a|A|1272
9EBB|1|a|U|1273
9EBB|1|a|C|1274

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain 9
Small ribosomal subunit protein uS14
Chain c
30S ribosomal protein S3
Chain j
30S ribosomal protein S10

Coloring options:

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