IL_9EC3_075

3D structure

PDB id

9EC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

AAUAUCGUGAACAC*GUGGGAGCGGGAU

Length

27 nucleotides

Bulged bases

9EC3|1|I|U|1949, 9EC3|1|I|A|1950

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EC3|1|I|A|1947
9EC3|1|I|A|1948
9EC3|1|I|U|1949
9EC3|1|I|A|1950
9EC3|1|I|U|1951
9EC3|1|I|C|1952
9EC3|1|I|G|1953
9EC3|1|I|U|1954
9EC3|1|I|G|1955
9EC3|1|I|A|1956
9EC3|1|I|A|1957
9EC3|1|I|C|1958
9EC3|1|I|A|1959
9EC3|1|I|C|1960
*
9EC3|1|I|G|1968
9EC3|1|I|U|1969
9EC3|1|I|G|1970
9EC3|1|I|G|1971
9EC3|1|I|G|1972
9EC3|1|I|A|1973
9EC3|1|I|G|1974
9EC3|1|I|C|1975
9EC3|1|I|G|1976
9EC3|1|I|G|1977
9EC3|1|I|G|1978
9EC3|1|I|A|1979
9EC3|1|I|U|1980

Current chains

Chain I

23S ribosomal RNA

Nearby chains