Loop IL_9EC3

3D structure

PDB id: 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å

Loop

Sequence: GUUUGUGUAGGAUAGGUGGGAG*CGUUGUUGAAAUACCACUCUGAU
Length: 45 nucleotides
Bulged bases: 9EC3|1|I|G|2347, 9EC3|1|I|U|2348, 9EC3|1|I|G|2349, 9EC3|1|I|U|2350, 9EC3|1|I|G|2353, 9EC3|1|I|U|2355, 9EC3|1|I|G|2361, 9EC3|1|I|U|2401, 9EC3|1|I|A|2408, 9EC3|1|I|U|2409, 9EC3|1|I|A|2410, 9EC3|1|I|C|2414
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

9EC3|1|I|G|2343
9EC3|1|I|U|2344
9EC3|1|I|U|2345
9EC3|1|I|U|2346
9EC3|1|I|G|2347
9EC3|1|I|U|2348
9EC3|1|I|G|2349
9EC3|1|I|U|2350
9EC3|1|I|A|2351
9EC3|1|I|G|2352
9EC3|1|I|G|2353
9EC3|1|I|A|2354
9EC3|1|I|U|2355
9EC3|1|I|A|2356
9EC3|1|I|G|2357
9EC3|1|I|G|2358
9EC3|1|I|U|2359
9EC3|1|I|G|2360
9EC3|1|I|G|2361
9EC3|1|I|G|2362
9EC3|1|I|A|2363
9EC3|1|I|G|2364
*
9EC3|1|I|C|2398
9EC3|1|I|G|2399
9EC3|1|I|U|2400
9EC3|1|I|U|2401
9EC3|1|I|G|2402
9EC3|1|I|U|2403
9EC3|1|I|U|2404
9EC3|1|I|G|2405
9EC3|1|I|A|2406
9EC3|1|I|A|2407
9EC3|1|I|A|2408
9EC3|1|I|U|2409
9EC3|1|I|A|2410
9EC3|1|I|C|2411
9EC3|1|I|C|2412
9EC3|1|I|A|2413
9EC3|1|I|C|2414
9EC3|1|I|U|2415
9EC3|1|I|C|2416
9EC3|1|I|U|2417
9EC3|1|I|G|2418
9EC3|1|I|A|2419
9EC3|1|I|U|2420

Current chains

Chain I: 23S ribosomal RNA

Nearby chains

Chain n: Transfer RNA; tRNA

IL_9EC3_090