IL_9EC3_133
3D structure
- PDB id
- 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- CGACG*CGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 9EC3|1|a|G|476
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EC3_133 not in the Motif Atlas
- Homologous match to IL_8B0X_021
- Geometric discrepancy: 0.4225
- The information below is about IL_8B0X_021
- Detailed Annotation
- tWW-tWH-tHS
- Broad Annotation
- tWW-tWH-tHS
- Motif group
- IL_82100.1
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
9EC3|1|a|C|445
9EC3|1|a|G|446
9EC3|1|a|A|447
9EC3|1|a|C|448
9EC3|1|a|G|449
*
9EC3|1|a|C|474
9EC3|1|a|G|475
9EC3|1|a|G|476
9EC3|1|a|U|477
9EC3|1|a|A|478
9EC3|1|a|G|479
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain p
- 30S ribosomal protein S16
Coloring options: