IL_9EC3_155

3D structure

PDB id

9EC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

GGAC*GUUCCCUUGUGGC

Length

17 nucleotides

Bulged bases

9EC3|1|a|C|1020, 9EC3|1|a|U|1022

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EC3|1|a|G|996
9EC3|1|a|G|997
9EC3|1|a|A|998
9EC3|1|a|C|999
*
9EC3|1|a|G|1016
9EC3|1|a|U|1017
9EC3|1|a|U|1018
9EC3|1|a|C|1019
9EC3|1|a|C|1020
9EC3|1|a|C|1021
9EC3|1|a|U|1022
9EC3|1|a|U|1023
9EC3|1|a|G|1024
9EC3|1|a|U|1025
9EC3|1|a|G|1026
9EC3|1|a|G|1027
9EC3|1|a|C|1028

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain 9

Small ribosomal subunit protein uS14