IL_9EHO_042

3D structure

PDB id

9EHO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Octopus ribosome, hybrid 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACGAAG*UGGAAGU

Length

13 nucleotides

Bulged bases

9EHO|1|5|G|1430

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EHO|1|5|A|1403
9EHO|1|5|C|1404
9EHO|1|5|G|1405
9EHO|1|5|A|1406
9EHO|1|5|A|1407
9EHO|1|5|G|1408
*
9EHO|1|5|U|1425
9EHO|1|5|G|1426
9EHO|1|5|G|1427
9EHO|1|5|A|1428
9EHO|1|5|A|1429
9EHO|1|5|G|1430
9EHO|1|5|U|1431

Current chains

Chain 5

28S rRNA

Nearby chains

Chain A

Large ribosomal subunit protein uL2

Chain R

Ribosomal protein L19

Chain p

Large ribosomal subunit protein eL43