IL_9EHO_089
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GG*CGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EHO_089 not in the Motif Atlas
- Homologous match to IL_9PN5_079
- Geometric discrepancy: 0.1398
- The information below is about IL_9PN5_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18824.3
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9EHO|1|5|G|2748
9EHO|1|5|G|2749
*
9EHO|1|5|C|3413
9EHO|1|5|G|3414
9EHO|1|5|A|3415
9EHO|1|5|C|3416
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain R
- Ribosomal protein L19
Coloring options: