IL_9EHO_121
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UU*AAAG
- Length
- 6 nucleotides
- Bulged bases
- 9EHO|1|5|A|4452
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EHO_121 not in the Motif Atlas
- Homologous match to IL_9AXU_103
- Geometric discrepancy: 0.1
- The information below is about IL_9AXU_103
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_94991.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 17
Unit IDs
9EHO|1|5|U|4432
9EHO|1|5|U|4433
*
9EHO|1|5|A|4450
9EHO|1|5|A|4451
9EHO|1|5|A|4452
9EHO|1|5|G|4453
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain H
- Large ribosomal subunit protein uL6
- Chain m
- Ubiquitin-ribosomal protein eL40 fusion protein
Coloring options: