IL_9EHO_124

3D structure

PDB id

9EHO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Octopus ribosome, hybrid 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGCUAC*GGACCCG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EHO|1|5|C|4711
9EHO|1|5|G|4712
9EHO|1|5|G|4713
9EHO|1|5|C|4714
9EHO|1|5|U|4715
9EHO|1|5|A|4716
9EHO|1|5|C|4717
*
9EHO|1|5|G|4848
9EHO|1|5|G|4849
9EHO|1|5|A|4850
9EHO|1|5|C|4851
9EHO|1|5|C|4852
9EHO|1|5|C|4853
9EHO|1|5|G|4854

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain O

Large ribosomal subunit protein uL13