IL_9EHO_125
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCCAGUAC*GGAACCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|U|4728
9EHO|1|5|C|4729
9EHO|1|5|C|4730
9EHO|1|5|A|4731
9EHO|1|5|G|4732
9EHO|1|5|U|4733
9EHO|1|5|A|4734
9EHO|1|5|C|4735
*
9EHO|1|5|G|4740
9EHO|1|5|G|4741
9EHO|1|5|A|4742
9EHO|1|5|A|4743
9EHO|1|5|C|4744
9EHO|1|5|C|4745
9EHO|1|5|G|4746
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain H
- Large ribosomal subunit protein uL6
- Chain V
- Large ribosomal subunit protein uL14
- Chain m
- Ubiquitin-ribosomal protein eL40 fusion protein
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