IL_9EHO_153
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUCAUG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 9EHO|1|AA|C|66, 9EHO|1|AA|U|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EHO_153 not in the Motif Atlas
- Homologous match to IL_9PN5_148
- Geometric discrepancy: 0.2718
- The information below is about IL_9PN5_148
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.4
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9EHO|1|AA|U|64
9EHO|1|AA|U|65
9EHO|1|AA|C|66
9EHO|1|AA|A|67
9EHO|1|AA|U|68
9EHO|1|AA|G|69
*
9EHO|1|AA|U|84
9EHO|1|AA|G|85
9EHO|1|AA|A|86
9EHO|1|AA|A|87
9EHO|1|AA|A|88
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain HH
- Small ribosomal subunit protein eS6
- Chain ZZ
- 40S ribosomal protein S24
Coloring options: