3D structure

PDB id
9EHO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Octopus ribosome, hybrid 80S
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
UC*GGA
Length
5 nucleotides
Bulged bases
9EHO|1|AA|G|752
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9EHO|1|AA|U|740
9EHO|1|AA|C|741
*
9EHO|1|AA|G|751
9EHO|1|AA|G|752
9EHO|1|AA|A|753

Current chains

Chain AA
18S rRNA

Nearby chains

Chain FF
40S ribosomal protein S4
Chain KK
Small ribosomal subunit protein uS4
Chain ZZ
40S ribosomal protein S24

Coloring options:

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