IL_9EHO_180

3D structure

PDB id

9EHO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Octopus ribosome, hybrid 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAUC*GCAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EHO|1|AA|G|1546
9EHO|1|AA|A|1547
9EHO|1|AA|U|1548
9EHO|1|AA|C|1549
*
9EHO|1|AA|G|1628
9EHO|1|AA|C|1629
9EHO|1|AA|A|1630
9EHO|1|AA|C|1631

Current chains

Chain AA

18S rRNA

Nearby chains

Chain CC

Small ribosomal subunit protein eS1

Chain OO

Small ribosomal subunit protein uS15

Chain cc

40S ribosomal protein S27