3D structure

PDB id
9EHO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Octopus ribosome, hybrid 80S
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CGC*GAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9EHO|1|AA|C|1716
9EHO|1|AA|G|1717
9EHO|1|AA|C|1718
*
9EHO|1|AA|G|1751
9EHO|1|AA|A|1752
9EHO|1|AA|G|1753

Current chains

Chain AA
18S rRNA

Nearby chains

Chain BB
Small ribosomal subunit protein uS2
Chain CC
Small ribosomal subunit protein eS1
Chain OO
Small ribosomal subunit protein uS15
Chain bb
40S ribosomal protein S26

Coloring options:

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