IL_9ELY_005

3D structure

PDB id

9ELY (explore in PDB, NAKB, or RNA 3D Hub)

Description

raiA RNA motif (Clostridium acetobutylicum)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUGCGGCUUAGAAGUAAG*CGAGUGUGGGGUC

Length

32 nucleotides

Bulged bases

9ELY|1|A|G|84, 9ELY|1|A|A|95, 9ELY|1|A|A|96

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ELY|1|A|G|83
9ELY|1|A|G|84
9ELY|1|A|U|85
9ELY|1|A|G|86
9ELY|1|A|C|87
9ELY|1|A|G|88
9ELY|1|A|G|89
9ELY|1|A|C|90
9ELY|1|A|U|91
9ELY|1|A|U|92
9ELY|1|A|A|93
9ELY|1|A|G|94
9ELY|1|A|A|95
9ELY|1|A|A|96
9ELY|1|A|G|97
9ELY|1|A|U|98
9ELY|1|A|A|99
9ELY|1|A|A|100
9ELY|1|A|G|101
*
9ELY|1|A|C|169
9ELY|1|A|G|170
9ELY|1|A|A|171
9ELY|1|A|G|172
9ELY|1|A|U|173
9ELY|1|A|G|174
9ELY|1|A|U|175
9ELY|1|A|G|176
9ELY|1|A|G|177
9ELY|1|A|G|178
9ELY|1|A|G|179
9ELY|1|A|U|180
9ELY|1|A|C|181

Current chains

Chain A

raiA RNA

Nearby chains