IL_9F1B_012

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

U(OMU)CC(PSU)U(OMU)G*CAUUCGA

Length

15 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|A2|U|115
9F1B|1|A2|OMU|116
9F1B|1|A2|C|117
9F1B|1|A2|C|118
9F1B|1|A2|PSU|119
9F1B|1|A2|U|120
9F1B|1|A2|OMU|121
9F1B|1|A2|G|122
*
9F1B|1|A2|C|343
9F1B|1|A2|A|344
9F1B|1|A2|U|345
9F1B|1|A2|U|346
9F1B|1|A2|C|347
9F1B|1|A2|G|348
9F1B|1|A2|A|349

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ad

40S ribosomal protein S4

Chain Ah

40S ribosomal protein S8

Chain Ak

40S ribosomal protein S11